Basic Information
Locus ID:
gene.Cymno01g05070
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
heat shock
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 4729911 | 4733110 | + | gene.Cymno01g05070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 79,740.62 Da | 40.78 | 86.72 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 15 | 202 | 1.59633E-103 | - |
| Pfam | PF00183 | Hsp90 protein | 184 | 673 | 8.9E-215 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 28 | 180 | 4.2E-13 | IPR003594 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 538 | 660 | 7.32E-36 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 259 | 514 | 2.05E-99 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 5 | 212 | 4.52E-71 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 427 | 513 | 3.4E-37 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 1 | 226 | 7.6E-91 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 258 | 426 | 4.9E-79 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 514 | 664 | 2.0E-60 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 28 | 182 | 2.2E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 1 | 699 | 2.0E-243 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 26 | 35 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 119 | 141 | 3.3E-81 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 170 | 187 | 3.3E-81 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 6 | 26 | 3.3E-81 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 94 | 111 | 3.3E-81 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 76 | 93 | 3.3E-81 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 27 | 49 | 3.3E-81 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 188 | 206 | 3.3E-81 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 3 | 661 | 26.032887 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 680 | 699 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 671 | 699 | - | - |
| Coils | Coil | Coil | 518 | 538 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56030.1 | heat shock protein 81-2. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. | 0 |
| RefSeq | XP_020264236.1 | heat shock protein 81-1 isoform X2 [Asparagus officinalis] | 0 |
| A2YWQ1 | Heat shock protein 81-1 OS=Oryza sativa subsp. indica OX=39946 GN=HSP81-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A804KIR9 | (wild Malaysian banana) hypothetical protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=GSMUA_230690.1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology