Basic Information
Locus ID:
gene.Cymno01g04630
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 4077814 | 4080869 | + | gene.Cymno01g04630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 75,557.77 Da | 38.65 | 80.50 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 353 | 647 | 1.78234E-125 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 322 | 633 | 4.2E-91 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 353 | 659 | 1.38E-71 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 355 | 652 | 1.3E-45 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 204 | - | - |
| Coils | Coil | Coil | 284 | 304 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_008794739.2 | probable galacturonosyltransferase 4 isoform X3 [Phoenix dactylifera] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CA27 | Hexosyltransferase OS=Phoenix dactylifera OX=42345 GN=LOC103710668 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology