Basic Information
Locus ID:
gene.Cymno01g02190
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 1747488 | 1753427 | + | gene.Cymno01g02190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.26 | 64,670.26 Da | 36.98 | 80.03 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 96 | 354 | 4.78162E-138 | - |
| Pfam | PF13499 | EF-hand domain pair | 473 | 536 | 1.5E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 404 | 463 | 1.6E-8 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 97 | 355 | 4.0E-75 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 384 | 562 | 2.12E-40 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 85 | 378 | 2.53E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 364 | 539 | 1.9E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 363 | 5.5E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 98 | 182 | 6.4E-27 | - |
| SMART | SM00220 | serkin_6 | 97 | 355 | 3.3E-99 | IPR000719 |
| SMART | SM00054 | efh_1 | 438 | 466 | 0.042 | IPR002048 |
| SMART | SM00054 | efh_1 | 402 | 430 | 8.9E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 474 | 502 | 0.048 | IPR002048 |
| SMART | SM00054 | efh_1 | 510 | 538 | 1.1E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 434 | 469 | 9.073802 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 97 | 355 | 48.569382 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 470 | 505 | 11.835447 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 506 | 541 | 13.983393 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 398 | 433 | 15.350267 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 217 | 229 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 483 | 495 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 411 | 423 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 447 | 459 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 519 | 531 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 103 | 126 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_023905862.1 | calcium-dependent protein kinase 10-like [Quercus suber] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5FTS5 | calcium-dependent protein kinase 10-like OS=Ananas comosus OX=4615 GN=LOC109715759 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology