Basic Information
Locus ID:
gene.Cymno01g02010
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 1619901 | 1626944 | - | gene.Cymno01g02010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.99 | 92,007.58 Da | 40.41 | 92.43 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 545 | 809 | 3.7E-110 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 200 | 337 | 3.7E-23 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 195 | 326 | 3.23E-20 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 176 | 423 | 1.6E-49 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 99 | 809 | 1.8E-217 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 196 | 426 | 26.398993 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 539 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 546 | - | - |
| Coils | Coil | Coil | 509 | 529 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_010928306.1 | translocase of chloroplast 90, chloroplastic isoform X1 [Elaeis guineensis] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3S4PIR2 | Translocase of chloroplast 90, chloroplastic isoform X1 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02015900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology