Basic Information
Locus ID:
gene.Cymno01g00110
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 136305 | 139897 | + | gene.Cymno01g00110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 46,869.92 Da | 49.25 | 57.08 | -0.93 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 216 | 297 | 8.4E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 263 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_010917924.1 | protein WVD2-like 4 [Elaeis guineensis] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3S3QJL9 | Protein WVD2-like protein 4 isoform X2 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01431100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology