Basic Information
Locus ID:
gene-QYE76_071986
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_251 | 220224 | 224832 | - | gene-QYE76_071986 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 102,979.90 Da | 53.86 | 79.07 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 842 | 883 | 1.05552E-23 | - |
| CDD | cd14066 | STKc_IRAK | 551 | 813 | 1.70631E-84 | - |
| CDD | cd01989 | STK_N | 57 | 212 | 2.5764E-46 | - |
| Pfam | PF00582 | Universal stress protein family | 56 | 180 | 3.5E-6 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 548 | 777 | 3.5E-41 | IPR000719 |
| Pfam | PF04564 | U-box domain | 839 | 907 | 3.0E-17 | IPR003613 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 520 | 803 | 1.19E-67 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 56 | 177 | 2.18E-9 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 828 | 910 | 2.3E-23 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 56 | 198 | 4.4E-10 | IPR014729 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 837 | 913 | 3.7E-27 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 523 | 617 | 6.5E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 618 | 822 | 6.0E-50 | - |
| SMART | SM00220 | serkin_6 | 545 | 814 | 8.3E-32 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 841 | 904 | 8.6E-27 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 837 | 911 | 29.254496 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 545 | 814 | 36.032524 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 551 | 572 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 663 | 675 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 270 | - | - |
| Coils | Coil | Coil | 399 | 419 | - | - |
| Coils | Coil | Coil | 375 | 395 | - | - |
| Coils | Coil | Coil | 427 | 520 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_051193418.1 | LOW QUALITY PROTEIN: U-box domain-containing protein 33-like [Lolium perenne] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453P7Y1 | RING-type E3 ubiquitin transferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology