Basic Information
Locus ID:
gene-QYE76_071785
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
MDM2/MDM4 family protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 429403418 | 429405578 | + | gene-QYE76_071785 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 22,637.70 Da | 39.59 | 67.39 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 22 | 69 | 3.4E-7 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 16 | 76 | 9.13E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 20 | 190 | 1.6E-11 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 23 | 69 | 11.722122 | IPR001841 |
| Coils | Coil | Coil | 176 | 196 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03450.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_051199320.1 | uncharacterized protein LOC127312806 isoform X1 [Lolium perenne] | 0 |
| A0A974CYQ5 | E3 ubiquitin-protein ligase rfwd3.S OS=Xenopus laevis OX=8355 GN=rfwd3.S PE=1 SV=1 | 0 | |
| TrEMBL | A0A453JBU9 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH01.2505 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0418480.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_071785 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G618900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4BG062430, gene_TRIDC5AG077330 |
| Poaceae | Triticum aestivum | 5 | TraesCS4B02G380900.1, TraesCS4B02G381000.1 ... |