Basic Information
Locus ID:
gene-QYE76_071767
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 429077548 | 429080937 | + | gene-QYE76_071767 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 74,626.80 Da | 66.19 | 65.14 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 614 | 654 | 1.28348E-19 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 612 | 659 | 2.5E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 614 | 660 | 1.63E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 605 | 665 | 5.7E-13 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 615 | 654 | 10.689412 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 302 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_051183854.1 | uncharacterized protein LOC127297571 [Lolium perenne] | 0 |
| Q24746 | Protein neuralized OS=Drosophila virilis OX=7244 GN=neur PE=4 SV=1 | 0 | |
| TrEMBL | A0A0A9DTT5 | RING-type domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology