Basic Information
Locus ID:
gene-QYE76_071678
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 426297735 | 426300050 | + | gene-QYE76_071678 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 84,951.65 Da | 43.15 | 84.01 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 21 | 169 | 4.19806E-7 | IPR002083 |
| CDD | cd00121 | MATH | 431 | 556 | 1.2222E-16 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 598 | 701 | 2.2E-19 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 220 | 321 | 1.3E-24 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 218 | 321 | 3.22E-26 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 20 | 172 | 5.07E-8 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 581 | 700 | 1.1E-21 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 428 | 559 | 4.74E-18 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 197 | 322 | 3.4E-30 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 19 | 172 | 2.4E-9 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 705 | 769 | 8.0E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 581 | 704 | 1.2E-23 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 323 | 404 | 2.1E-6 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 429 | 559 | 1.2E-11 | IPR008974 |
| SMART | SM00225 | BTB_4 | 220 | 322 | 5.5E-23 | IPR000210 |
| SMART | SM00225 | BTB_4 | 600 | 702 | 1.5E-15 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 600 | 664 | 13.653165 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 430 | 555 | 9.498335 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 220 | 288 | 17.375925 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_051230230.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium perenne] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IXS5 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9BG0712650 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0219660.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 12 | gene-QYE76_000351, gene-QYE76_018036, gene-QYE76_020460 ... |
| Poaceae | Puccinellia tenuiflora | 8 | Pt_Chr0100491, Pt_Chr0106602, Pt_Chr0206622, Pt_Chr0206755 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G840100 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC3AG009110, gene_TRIDC3AG071980 ... |
| Poaceae | Triticum aestivum | 11 | TraesCS3A02G009700.1.cds1, TraesCS3A02G076600.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb418740_P001 |