Basic Information
Locus ID:
gene-QYE76_071452
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 419022352 | 419023470 | + | gene-QYE76_071452 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 41,432.96 Da | 35.88 | 86.67 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 50 | 170 | 9.05815E-20 | IPR002083 |
| Pfam | PF00917 | MATH domain | 67 | 168 | 4.5E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 201 | 310 | 7.7E-26 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 46 | 183 | 6.7E-28 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 183 | 311 | 1.69E-30 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 46 | 177 | 5.5E-25 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 184 | 304 | 1.2E-34 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 311 | 372 | 4.6E-14 | - |
| SMART | SM00225 | BTB_4 | 209 | 311 | 2.3E-22 | IPR000210 |
| SMART | SM00061 | math_3 | 47 | 155 | 0.0022 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 209 | 273 | 17.169106 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 47 | 172 | 16.91349 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_047083368.1 | LOW QUALITY PROTEIN: BTB/POZ and MATH domain-containing protein 1-like [Lolium rigidum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6XV58 | Speckle-type POZ protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology