Basic Information
Locus ID:
gene-QYE76_071424
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 418564811 | 418565452 | + | gene-QYE76_071424 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 22,651.42 Da | 69.65 | 70.99 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17123 | RING-like zinc finger | 4 | 31 | 2.9E-8 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 3 | 55 | 1.67E-9 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 80 | 125 | 1.57E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 129 | 7.1E-8 | IPR013083 |
| SMART | SM00184 | ring_2 | 82 | 118 | 0.073 | IPR001841 |
| SMART | SM00184 | ring_2 | 4 | 40 | 1.3E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 4 | 41 | 10.910707 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051230204.1 | E3 ubiquitin-protein ligase WAV3-like [Lolium perenne] | 0 |
| TrEMBL | A0A077S6A8 | VWFA domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF056300040CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_071424 |
| Poaceae | Puccinellia tenuiflora | 9 | Pt_Chr0100096, Pt_Chr0100209, Pt_Chr0100707, Pt_Chr0100708 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G624400 |