Basic Information
Locus ID:
gene-QYE76_071336
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
cellular macromolecule catabolic process
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 416183222 | 416184902 | + | gene-QYE76_071336 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 41,724.14 Da | 38.91 | 85.56 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05056 | Protein of unknown function (DUF674) | 9 | 276 | 6.8E-35 | IPR007750 |
| Pfam | PF00240 | Ubiquitin family | 306 | 362 | 3.0E-7 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 305 | 364 | 3.53E-10 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 299 | 364 | 1.1E-10 | - |
| SMART | SM00213 | ubq_7 | 289 | 365 | 1.1E-5 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 289 | 361 | 12.378525 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01120.1 | Protein of unknown function (DUF674). | 0 |
| RefSeq | XP_051230184.1 | uncharacterized protein LOC127348131 [Lolium perenne] | 0 |
| TrEMBL | A0A3B6JR80 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH01.5106 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3BG0296450 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.1HG0075250.1, HORVU.MOREX.r3.4HG0413000.2 ... |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_062937, gene-QYE76_071335, gene-QYE76_071336 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G502800 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0100642, Pt_Chr0100660, Pt_Chr0100663 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr01G038660 |
| Poaceae | Thinopyrum elongatum | 5 | Tel1E01G446600, Tel4E01G571500, Tel4E01G571600 ... |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC4BG058660, gene_TRIDC4BG058770 ... |
| Poaceae | Triticum aestivum | 19 | TraesCS1A02G273800.1, TraesCS1B02G283500.1 ... |