Basic Information
Locus ID:
gene-QYE76_071321
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 415510113 | 415513847 | + | gene-QYE76_071321 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 53,811.64 Da | 43.34 | 70.32 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 200 | 476 | 2.80092E-39 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 311 | 346 | 7.5E-6 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 232 | 287 | 3.3E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 351 | 391 | 0.0015 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 440 | 476 | 1.8E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 179 | 499 | 3.66E-60 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 173 | 481 | 4.8E-127 | IPR015943 |
| SMART | SM00320 | WD40_4 | 223 | 263 | 0.057 | IPR001680 |
| SMART | SM00320 | WD40_4 | 394 | 434 | 460.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 179 | 220 | 140.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 266 | 303 | 0.27 | IPR001680 |
| SMART | SM00320 | WD40_4 | 349 | 391 | 1.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 437 | 476 | 3.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 307 | 346 | 1.7E-7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 314 | 355 | 13.649761 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 231 | 272 | 9.271977 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 444 | 477 | 11.73468 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 314 | 346 | 11.022865 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 444 | 477 | 14.184453 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 463 | 477 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 66 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_047083146.1 | protein FIZZY-RELATED 2-like [Lolium rigidum] | 0 |
| Q8L3Z8 | Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=FZR2 PE=1 SV=1 | 0 | |
| TrEMBL | F2E2N2 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology