Basic Information
Locus ID:
gene-QYE76_070761
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ubiquitin-conjugating enzyme
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 396944974 | 396949312 | + | gene-QYE76_070761 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.37 | 32,392.98 Da | 61.23 | 73.77 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 111 | 247 | 7.98524E-47 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 114 | 246 | 5.4E-37 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 108 | 252 | 1.93E-43 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 101 | 261 | 2.7E-46 | IPR016135 |
| SMART | SM00212 | ubc_7 | 108 | 252 | 7.5E-48 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 104 | 252 | 41.703098 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 177 | 193 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 281 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 110 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41340.1 | ubiquitin conjugating enzyme 4. Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated. | 0 |
| RefSeq | XP_047089450.1 | ubiquitin-conjugating enzyme E2 4-like [Lolium rigidum] | 0 |
| P42748 | Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6IUF3 | UBC core domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology