Basic Information
Locus ID:
gene-QYE76_070688
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Alpha mannosidase, middle domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 395091295 | 395102670 | - | gene-QYE76_070688 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 114,230.74 Da | 39.19 | 81.47 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 40 | 317 | 1.58752E-179 | - |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 41 | 353 | 3.8E-92 | IPR000602 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 604 | 818 | 5.6E-44 | IPR011682 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 900 | 1006 | 2.5E-12 | IPR041147 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 358 | 450 | 9.3E-22 | IPR015341 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 29 | 356 | 4.06E-108 | IPR011330 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 462 | 1009 | 1.19E-136 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 358 | 457 | 1.99E-28 | IPR028995 |
| Gene3D | G3DSA:2.60.40.1360 | - | 887 | 1012 | 2.0E-34 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 40 | 321 | 4.7E-120 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 322 | 400 | 3.2E-30 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 401 | 457 | 1.7E-23 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1180 | - | 479 | 601 | 5.9E-28 | IPR013780 |
| Gene3D | G3DSA:2.70.98.30 | - | 602 | 866 | 1.3E-92 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 358 | 432 | 4.3E-23 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13980.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_051182916.1 | alpha-mannosidase At3g26720-like [Lolium perenne] | 0 |
| Q8LPJ3 | Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana OX=3702 GN=At5g13980 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2CNF5 | Alpha-mannosidase OS=Brachypodium distachyon OX=15368 GN=100832076 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology