Basic Information
Locus ID:
gene-QYE76_070488
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 389181666 | 389189159 | - | gene-QYE76_070488 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 108,938.78 Da | 48.08 | 79.69 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 263 | 452 | 3.0E-51 | IPR013103 |
| Pfam | PF00646 | F-box domain | 528 | 571 | 1.7E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 526 | 594 | 1.18E-8 | IPR036047 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 265 | 457 | 9.01E-20 | IPR043502 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 206 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 206 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.2 | - | 0 |
| RefSeq | XP_047083684.1 | uncharacterized protein LOC124694778, partial [Lolium rigidum] | 0 |
| Q94HW2 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7Q7T4 | F-box domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.4HG0402960.1, HORVU.MOREX.r3.4HG0403320.1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_070487, gene-QYE76_070488 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0101290 |
| Poaceae | Thinopyrum elongatum | 6 | Tel4E01G474600, Tel4E01G479000, Tel4E01G479200 ... |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC4AG002500, gene_TRIDC4AG002580 ... |
| Poaceae | Triticum aestivum | 18 | TraesCS4A02G018600.1.cds1, TraesCS4A02G018700.1 ... |