HalophFGD

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Basic Information
Locus ID: gene-QYE76_069903
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr4 369089343 369090410 - gene-QYE76_069903
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.26 39,691.18 Da 54.53 109.61 -0.03
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 16 52 3.0E-7 IPR001810
SUPERFAMILY SSF52047 RNI-like 170 335 2.28E-8 -
SUPERFAMILY SSF81383 F-box domain 15 58 3.53E-11 IPR036047
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 151 352 1.5E-6 IPR032675
Gene3D G3DSA:1.20.1280.50 - 6 55 8.5E-8 -
SMART SM00256 fbox_2 20 61 0.0056 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G02920.1 F-box/RNI-like superfamily protein. 0
RefSeq XP_051229977.1 putative F-box/FBD/LRR-repeat protein At1g22000 [Lolium perenne] 0
Swiss-Prot Q9LV26 Putative F-box/LRR-repeat protein At3g18150 OS=Arabidopsis thaliana OX=3702 GN=At3g18150 PE=4 SV=2 0
TrEMBL A0A8I6X1Q8 F-box domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Lolium multiflorum 3 gene-QYE76_012079, gene-QYE76_030378, gene-QYE76_069903
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.