Basic Information
Locus ID:
gene-QYE76_069839
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 367061039 | 367064902 | + | gene-QYE76_069839 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 45,249.92 Da | 39.07 | 73.93 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09279 | RNase_HI_like | 309 | 387 | 7.55995E-27 | - |
| Pfam | PF13456 | Reverse transcriptase-like | 306 | 386 | 1.6E-14 | IPR002156 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 303 | 384 | 6.96E-15 | IPR012337 |
| Gene3D | G3DSA:3.30.420.10 | - | 289 | 391 | 1.1E-19 | IPR036397 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051190174.1 | uncharacterized protein LOC127303488 [Lolium perenne] | 0 |
| TrEMBL | A0A2S3IRQ1 | Ribonuclease H OS=Panicum hallii OX=206008 GN=PAHAL_9G466200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000027960 |
| Poaceae | Lolium multiflorum | 225 | gene-QYE76_000112, gene-QYE76_000237, gene-QYE76_000651 ... |
| Poaceae | Oryza sativa | 1 | ChrSy.fgenesh.mRNA.19 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr05G009620, Chr05G009630, Chr20G008400 |