Basic Information
Locus ID:
gene-QYE76_069777
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Plant mobile domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 364573577 | 364581595 | - | gene-QYE76_069777 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 138,469.13 Da | 47.02 | 75.51 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10536 | Plant mobile domain | 750 | 1089 | 7.9E-51 | IPR019557 |
| Pfam | PF10551 | MULE transposase domain | 492 | 593 | 3.6E-18 | IPR018289 |
| Pfam | PF03108 | MuDR family transposase | 294 | 357 | 1.9E-8 | IPR004332 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48120.1 | hydrolases;protein serine/threonine phosphatases. | 0 |
| RefSeq | XP_051228691.1 | serine/threonine-protein phosphatase 7 long form homolog [Lolium perenne] | 0 |
| Q9LNG5 | Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1 | 0 | |
| TrEMBL | Q10ML8 | Transposon protein, putative, Mutator sub-class OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os03g19160 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 40 | gene-QYE76_003106, gene-QYE76_004905, gene-QYE76_007129 ... |
| Poaceae | Oryza coarctata | 1 | Oco04G018420 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5BG047900 |