Basic Information
Locus ID:
gene-QYE76_069442
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Belongs to the FBPase class 1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 351314491 | 351316474 | - | gene-QYE76_069442 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 34,678.95 Da | 31.74 | 64.19 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 255 | 304 | 1.8E-9 | IPR013103 |
| Pfam | PF00098 | Zinc knuckle | 40 | 52 | 7.9E-5 | IPR001878 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 29 | 62 | 8.72E-6 | IPR036875 |
| Gene3D | G3DSA:4.10.60.10 | - | 30 | 65 | 1.7E-6 | - |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 40 | 55 | 8.647267 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko00010 (Glycolysis / Gluconeogenesis)
map00010 (Glycolysis / Gluconeogenesis)
ko00030 (Pentose phosphate pathway)
map00030 (Pentose phosphate pathway)
ko00051 (Fructose and mannose metabolism)
map00051 (Fructose and mannose metabolism)
ko00680 (Methane metabolism)
map00680 (Methane metabolism)
ko00710 (Carbon fixation by Calvin cycle)
map00710 (Carbon fixation by Calvin cycle)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051221414.1 | uncharacterized mitochondrial protein AtMg00820-like [Lolium perenne] | 0 |
| TrEMBL | Q8LSK0 | Gag and Pol OS=Zea mays OX=4577 GN=gag/pol PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg49723 |
| Asteraceae | Flaveria trinervia | 3 | Ftri16G33087, Ftri3G20908, Ftri8G30898 |
| Poaceae | Lolium multiflorum | 72 | gene-QYE76_001045, gene-QYE76_002921, gene-QYE76_003125 ... |