Basic Information
Locus ID:
gene-QYE76_069372
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 349111955 | 349113277 | + | gene-QYE76_069372 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 46,325.36 Da | 39.04 | 106.84 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 33 | 75 | 9.33188E-21 | - |
| Pfam | PF04564 | U-box domain | 29 | 101 | 3.7E-20 | IPR003613 |
| SUPERFAMILY | SSF48371 | ARM repeat | 188 | 418 | 2.11E-14 | IPR016024 |
| SUPERFAMILY | SSF57850 | RING/U-box | 26 | 104 | 5.3E-28 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 28 | 102 | 2.6E-28 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 127 | 424 | 1.8E-13 | IPR011989 |
| SMART | SM00504 | Ubox_2 | 32 | 96 | 1.4E-29 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 28 | 103 | 33.70388 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37490.1 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_051182371.1 | U-box domain-containing protein 21-like [Lolium perenne] | 0 |
| Q5PNY6 | U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6IT38 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology