HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QYE76_069235
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: gag-polypeptide of LTR copia-type
Maps and Mapping Data
Chromosome Start End Strand ID
chr4 343857311 343858945 - gene-QYE76_069235
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.40 55,756.94 Da 63.95 79.85 0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF14223 gag-polypeptide of LTR copia-type 298 430 4.5E-15 -
MobiDBLite mobidb-lite consensus disorder prediction 436 456 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_051220390.1 uncharacterized protein LOC127338219 [Lolium perenne] 0
TrEMBL A0A453NWQ9 gag_pre-integrs domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Lolium multiflorum 7 gene-QYE76_021354, gene-QYE76_024503, gene-QYE76_029637 ...
gene-QYE76_056172, gene-QYE76_058471, gene-QYE76_058475, gene-QYE76_069235
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.