Basic Information
Locus ID:
gene-QYE76_068908
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
DNA (cytosine-5-)-methyltransferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 333055003 | 333065978 | + | gene-QYE76_068908 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 156,282.31 Da | 48.42 | 73.18 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18635 | CD_CMT3_like | 966 | 1022 | 1.47565E-28 | - |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 1031 | 1395 | 3.6E-35 | IPR001525 |
| Pfam | PF00385 | Chromo (CHRromatin Organisation MOdifier) domain | 972 | 1020 | 1.1E-7 | IPR023780 |
| Pfam | PF01426 | BAH domain | 710 | 823 | 5.6E-13 | IPR001025 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 862 | 1396 | 9.36E-75 | IPR029063 |
| SUPERFAMILY | SSF54160 | Chromo domain-like | 957 | 1026 | 9.35E-12 | IPR016197 |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 1185 | 1362 | 2.5E-222 | - |
| Gene3D | G3DSA:2.30.30.490 | - | 642 | 810 | 5.5E-49 | IPR043151 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 864 | 1413 | 2.5E-222 | - |
| SMART | SM00439 | BAH_4 | 708 | 825 | 1.9E-25 | IPR001025 |
| SMART | SM00298 | chromo_7 | 966 | 1025 | 3.2E-4 | IPR000953 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 708 | 825 | 19.492834 | IPR001025 |
| ProSiteProfiles | PS50013 | Chromo and chromo shadow domain profile. | 967 | 1020 | 11.163801 | IPR000953 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 862 | 1403 | 44.793137 | IPR001525 |
| ProSitePatterns | PS00598 | Chromo domain signature. | 990 | 1010 | - | IPR023779 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 1037 | 1049 | - | IPR018117 |
| ProSitePatterns | PS00095 | C-5 cytosine-specific DNA methylases C-terminal signature. | 1378 | 1396 | - | IPR031303 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 1080 | 1094 | 4.1E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 1126 | 1139 | 4.1E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 863 | 879 | 4.1E-11 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 341 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 266 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 89 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19020.2 | - | 0 |
| RefSeq | XP_051181902.1 | DNA (cytosine-5)-methyltransferase CMT2-like isoform X13 [Lolium perenne] | 0 |
| Q5KQL9 | DNA (cytosine-5)-methyltransferase CMT2 OS=Oryza sativa subsp. japonica OX=39947 GN=CMT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453ICE7 | DNA (cytosine-5-)-methyltransferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology