Basic Information
Locus ID:
gene-QYE76_068759
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 328528668 | 328529244 | - | gene-QYE76_068759 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 12,728.33 Da | 32.27 | 86.47 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 3 | 84 | 1.0E-16 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 92 | 1.33E-18 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 98 | 2.5E-28 | - |
| SMART | SM00213 | ubq_7 | 1 | 83 | 4.2E-12 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 87 | 17.256214 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36170.1 | Ubiquitin supergroup;Ribosomal protein L40e. | 0 |
| RefSeq | XP_051181780.1 | ubiquitin-60S ribosomal protein L40-1-like [Lolium perenne] | 0 |
| P0CH34 | Ubiquitin-ribosomal protein eL40z fusion protein OS=Oryza sativa subsp. japonica OX=39947 GN=Ub-CEP52-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453AL71 | Ubiquitin-like domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_020686, gene-QYE76_068757, gene-QYE76_068758 ... |