Basic Information
Locus ID:
gene-QYE76_068757
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ribosomal_L40e
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 328513773 | 328514300 | - | gene-QYE76_068757 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.90 | 19,170.31 Da | 42.75 | 75.89 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01020 | Ribosomal L40e family | 98 | 118 | 4.4E-6 | IPR001975 |
| Pfam | PF00240 | Ubiquitin family | 3 | 85 | 3.8E-16 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 90 | 1.08E-18 | IPR029071 |
| Gene3D | G3DSA:4.10.1060.50 | - | 98 | 127 | 1.5E-5 | IPR038587 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 96 | 2.1E-28 | - |
| SMART | SM00213 | ubq_7 | 1 | 85 | 1.3E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 89 | 17.343315 | IPR000626 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36170.1 | Ubiquitin supergroup;Ribosomal protein L40e. | 0 |
| RefSeq | XP_047084156.1 | ubiquitin-60S ribosomal protein L40-like [Lolium rigidum] | 0 |
| P0CH34 | Ubiquitin-ribosomal protein eL40z fusion protein OS=Oryza sativa subsp. japonica OX=39947 GN=Ub-CEP52-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6BZS4 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_020686, gene-QYE76_068757, gene-QYE76_068758 ... |