Basic Information
Locus ID:
gene-QYE76_068735
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 327966309 | 327973119 | - | gene-QYE76_068735 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 88,964.34 Da | 43.90 | 84.79 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 652 | 767 | 1.1E-9 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 651 | 771 | 2.16E-21 | IPR038765 |
| Gene3D | G3DSA:3.30.420.10 | - | 338 | 611 | 7.8E-44 | IPR036397 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 646 | 774 | 2.9E-21 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 651 | 778 | 15.154651 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 652 | 667 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 211 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57990.1 | ubiquitin-specific protease 23. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_051229846.1 | uncharacterized protein LOC127347723 [Lolium perenne] | 0 |
| Q9FPS4 | Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana OX=3702 GN=UBP23 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8I6X937 | HTH_Tnp_Tc3_2 domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology