Basic Information
Locus ID:
gene-QYE76_068712
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Transposase family tnp2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 327056786 | 327063827 | + | gene-QYE76_068712 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.32 | 107,864.71 Da | 52.66 | 69.19 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02992 | Transposase family tnp2 | 234 | 340 | 4.1E-53 | IPR004242 |
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 443 | 503 | 1.0E-12 | IPR025312 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 748 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 793 | 810 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 504 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 866 | 888 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 775 | 955 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 835 | 860 | - | - |
| Coils | Coil | Coil | 649 | 669 | - | - |
| Coils | Coil | Coil | 687 | 718 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051202323.1 | uncharacterized protein LOC127315924 [Lolium perenne] | 0 |
| TrEMBL | A0A8R7QJN3 | Transpos_assoc domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH01.2693, CH05.4449 |
| Poaceae | Lolium multiflorum | 24 | gene-QYE76_004977, gene-QYE76_006303, gene-QYE76_006527 ... |