Basic Information
Locus ID:
gene-QYE76_068628
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 324788092 | 324793830 | + | gene-QYE76_068628 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 114,647.91 Da | 40.53 | 79.21 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 736 | 999 | 6.46023E-85 | - |
| CDD | cd00054 | EGF_CA | 301 | 336 | 4.3605E-7 | - |
| Pfam | PF00069 | Protein kinase domain | 731 | 992 | 4.8E-46 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 20 | 84 | 3.2E-9 | IPR025287 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 352 | 420 | 2.3E-10 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 714 | 996 | 1.23E-75 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 301 | 336 | 4.93E-6 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 252 | 343 | 2.1E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 806 | 1018 | 1.7E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 694 | 805 | 5.6E-31 | - |
| SMART | SM00179 | egfca_6 | 301 | 343 | 1.3E-6 | IPR001881 |
| SMART | SM00181 | egf_5 | 304 | 343 | 0.011 | IPR000742 |
| SMART | SM00220 | serkin_6 | 730 | 994 | 8.9E-33 | IPR000719 |
| SMART | SM00181 | egf_5 | 599 | 644 | 20.0 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 730 | 996 | 37.657936 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 301 | 338 | 9.059372 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 301 | 326 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 736 | 759 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 850 | 862 | - | IPR008271 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 317 | 328 | - | IPR000152 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_051205991.1 | wall-associated receptor kinase 4-like [Lolium perenne] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6H4M7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 5 | HORVU.MOREX.r3.3HG0328800.1, HORVU.MOREX.r3.6HG0545410.1 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_068628 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G892100 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG086070 |
| Poaceae | Triticum aestivum | 7 | TraesCS3B02G596200.1, TraesCS3B02G596300.1 ... |