Basic Information
Locus ID:
gene-QYE76_067846
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
RHC1A
Description:
zinc-ribbon
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 296567535 | 296568401 | - | gene-QYE76_067846 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.33 | 32,337.91 Da | 77.55 | 50.07 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16667 | RING-H2_RNF126_like | 187 | 228 | 7.10779E-25 | - |
| Pfam | PF13639 | Ring finger domain | 186 | 228 | 1.6E-11 | IPR001841 |
| Pfam | PF14369 | zinc-ribbon | 6 | 37 | 4.5E-10 | IPR039525 |
| SUPERFAMILY | SSF57850 | RING/U-box | 167 | 234 | 7.51E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 150 | 234 | 1.8E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 187 | 227 | 1.4E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 187 | 228 | 12.267982 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 274 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40830.1 | RING-H2 finger C1A. Encodes a putative RING-H2 finger protein RHC1a. | 0 |
| RefSeq | XP_047090528.1 | probable E3 ubiquitin-protein ligase RHC1A [Lolium rigidum] | 0 |
| O22197 | Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1 | 0 | |
| TrEMBL | I1H5F8 | RING-type E3 ubiquitin transferase OS=Brachypodium distachyon OX=15368 GN=100834834 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology