Basic Information
Locus ID:
gene-QYE76_067785
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 294657008 | 294668210 | + | gene-QYE76_067785 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 96,307.86 Da | 51.72 | 73.93 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 36 | 135 | 4.12752E-12 | - |
| CDD | cd00159 | RhoGAP | 196 | 335 | 4.21621E-31 | - |
| Pfam | PF00169 | PH domain | 35 | 139 | 1.4E-12 | IPR001849 |
| Pfam | PF00620 | RhoGAP domain | 196 | 340 | 7.3E-30 | IPR000198 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 625 | 705 | 5.5E-22 | IPR025757 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 196 | 389 | 6.87E-33 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 29 | 146 | 1.84E-18 | - |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 166 | 389 | 2.1E-40 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 24 | 141 | 1.2E-17 | IPR011993 |
| SMART | SM00233 | PH_update | 34 | 142 | 1.9E-16 | IPR001849 |
| SMART | SM00324 | RhoGAP_3 | 193 | 384 | 1.1E-24 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 33 | 140 | 16.093601 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 187 | 387 | 30.008038 | IPR000198 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 858 | 877 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 571 | 585 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 585 | - | - |
| Coils | Coil | Coil | 674 | 708 | - | - |
| Coils | Coil | Coil | 830 | 850 | - | - |
| Coils | Coil | Coil | 590 | 610 | - | - |
| Coils | Coil | Coil | 615 | 649 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_047071698.1 | rho GTPase-activating protein 6-like isoform X1 [Lolium rigidum] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | I1H5B8 | Rho GTPase-activating protein 7 OS=Brachypodium distachyon OX=15368 GN=100835450 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology