halophFGD

Basic Information

Locus ID: gene-QYE76_066913

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: Integrase core domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	261730738	261733669	-	gene-QYE76_066913

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.57	65,819.97 Da	35.80	66.98	-0.62

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00665	Integrase core domain	112	207	1.3E-13	IPR001584
Pfam	PF02992	Transposase family tnp2	536	586	1.5E-13	IPR004242
Pfam	PF17921	Integrase zinc binding domain	40	95	5.6E-7	IPR041588
SUPERFAMILY	SSF53098	Ribonuclease H-like	109	229	3.79E-32	IPR012337
Gene3D	G3DSA:3.30.420.10	-	105	256	5.1E-36	IPR036397
Gene3D	G3DSA:1.10.340.70	-	2	93	2.4E-12	-
ProSiteProfiles	PS50994	Integrase catalytic domain profile.	104	271	20.82855	IPR001584
MobiDBLite	mobidb-lite	consensus disorder prediction	299	326	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	299	345	-	-

Gene Ontology

Biological Process:

GO:0015074 (DNA integration)

Molecular Function:

GO:0003676 (nucleic acid binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_051202093.1	uncharacterized protein LOC127315663 [Lolium perenne]	0
TrEMBL	A0A7H4LDH6	RNA-directed DNA polymerase OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS1264 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	112	gene-QYE76_001277, gene-QYE76_001352, gene-QYE76_001721 ... gene-QYE76_002495, gene-QYE76_003541, gene-QYE76_004443, gene-QYE76_004928, gene-QYE76_004941, gene-QYE76_005807, gene-QYE76_005830, gene-QYE76_005831, gene-QYE76_007803, gene-QYE76_008013, gene-QYE76_009230, gene-QYE76_010006, gene-QYE76_011087, gene-QYE76_011088, gene-QYE76_015340, gene-QYE76_015803, gene-QYE76_015804, gene-QYE76_016532, gene-QYE76_017682, gene-QYE76_017873, gene-QYE76_017875, gene-QYE76_018904, gene-QYE76_020250, gene-QYE76_021804, gene-QYE76_021865, gene-QYE76_023256, gene-QYE76_023756, gene-QYE76_023757, gene-QYE76_025100, gene-QYE76_025581, gene-QYE76_025582, gene-QYE76_026848, gene-QYE76_027131, gene-QYE76_027180, gene-QYE76_027298, gene-QYE76_028784, gene-QYE76_029705, gene-QYE76_030814, gene-QYE76_031025, gene-QYE76_031026, gene-QYE76_032944, gene-QYE76_033725, gene-QYE76_033726, gene-QYE76_035656, gene-QYE76_036097, gene-QYE76_037485, gene-QYE76_037940, gene-QYE76_037941, gene-QYE76_038016, gene-QYE76_039089, gene-QYE76_039328, gene-QYE76_040381, gene-QYE76_040873, gene-QYE76_040944, gene-QYE76_041380, gene-QYE76_041616, gene-QYE76_042404, gene-QYE76_042975, gene-QYE76_043639, gene-QYE76_043915, gene-QYE76_043916, gene-QYE76_044922, gene-QYE76_045526, gene-QYE76_046120, gene-QYE76_046263, gene-QYE76_046264, gene-QYE76_047074, gene-QYE76_047159, gene-QYE76_047736, gene-QYE76_048079, gene-QYE76_048135, gene-QYE76_048136, gene-QYE76_052370, gene-QYE76_052992, gene-QYE76_053032, gene-QYE76_053923, gene-QYE76_054108, gene-QYE76_055394, gene-QYE76_056823, gene-QYE76_057935, gene-QYE76_058184, gene-QYE76_058195, gene-QYE76_059337, gene-QYE76_059369, gene-QYE76_061050, gene-QYE76_061051, gene-QYE76_061199, gene-QYE76_061548, gene-QYE76_062122, gene-QYE76_062123, gene-QYE76_062506, gene-QYE76_062507, gene-QYE76_064177, gene-QYE76_064721, gene-QYE76_065021, gene-QYE76_066602, gene-QYE76_066729, gene-QYE76_066913, gene-QYE76_068003, gene-QYE76_068108, gene-QYE76_068932, gene-QYE76_069271, gene-QYE76_070149, gene-QYE76_070150, gene-QYE76_070245, gene-QYE76_070496, gene-QYE76_071305, gene-QYE76_071506, gene-QYE76_071866