Basic Information
Locus ID:
gene-QYE76_066734
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 254313480 | 254322242 | - | gene-QYE76_066734 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 168,056.19 Da | 45.48 | 81.34 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01647 | RT_LTR | 862 | 1057 | 3.03677E-74 | - |
| CDD | cd09274 | RNase_HI_RT_Ty3 | 1151 | 1269 | 1.41619E-56 | - |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 1120 | 1218 | 3.9E-34 | IPR041577 |
| Pfam | PF03732 | Retrotransposon gag protein | 291 | 381 | 4.2E-9 | IPR005162 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 901 | 1056 | 7.0E-25 | IPR000477 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 821 | 1252 | 3.0E-140 | IPR043502 |
| Gene3D | G3DSA:3.30.70.270 | - | 922 | 1057 | 1.3E-67 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 1066 | 1159 | 1.2E-27 | IPR043128 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 572 | 689 | 3.7E-5 | IPR021109 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 824 | 982 | 1.3E-67 | - |
| ProSiteProfiles | PS50878 | Reverse transcriptase (RT) catalytic domain profile. | 860 | 1064 | 8.773122 | IPR000477 |
| Coils | Coil | Coil | 1356 | 1376 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048538050.1 | uncharacterized protein LOC125516778, partial [Triticum urartu] | 0 |
| P04323 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A2G9HYA0 | RNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |