Basic Information
Locus ID:
gene-QYE76_066580
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
LYK4
Description:
LysM domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 247964283 | 247966343 | + | gene-QYE76_066580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 72,675.96 Da | 44.28 | 85.66 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 196 | 240 | 1.14337E-6 | IPR018392 |
| Pfam | PF01476 | LysM domain | 204 | 241 | 6.7E-6 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 395 | 574 | 5.3E-28 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 654 | 4.98E-52 | IPR011009 |
| SUPERFAMILY | SSF54106 | LysM domain | 196 | 242 | 2.49E-5 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 353 | 432 | 1.5E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 434 | 681 | 1.7E-42 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 184 | 253 | 1.4E-10 | IPR036779 |
| SMART | SM00257 | LysM_2 | 197 | 241 | 1.8E-5 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 196 | 240 | 11.031314 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 128 | 176 | 9.076081 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 318 | 654 | 28.414299 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 23 | 5.0 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 664 | 686 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_051180979.1 | lysM domain receptor-like kinase 4 [Lolium perenne] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | I1IL35 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100823698 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology