HalophFGD

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Basic Information
Locus ID: gene-QYE76_066273
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr4 236250185 236251426 + gene-QYE76_066273
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.03 45,778.14 Da 43.15 86.17 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 31 64 4.3E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 17 78 2.75E-8 IPR036047
Gene3D G3DSA:1.20.1280.50 - 27 66 3.0E-7 -
SMART SM00256 fbox_2 28 68 0.004 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_010237164.1 uncharacterized protein LOC100843410 [Brachypodium distachyon] 0
TrEMBL A0A6G1CYD8 F-box domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_000917 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.3HG0222450.1.CDS1 ...
HORVU.MOREX.r3.3HG0222500.1.CDS1
Poaceae Lolium multiflorum 1 gene-QYE76_066273
Poaceae Puccinellia tenuiflora 3 Pt_Chr0206543, Pt_Chr0207280, Pt_Chr0207281
Poaceae Triticum aestivum 3 TraesCS3D02G034400.1.cds1, TraesCS3D02G034600.1.cds1 ...
TraesCS3D02G035000.1.cds1
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