Basic Information
Locus ID:
gene-QYE76_066018
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 226405206 | 226406072 | + | gene-QYE76_066018 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 31,300.81 Da | 32.65 | 80.90 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 31 | 158 | 4.64688E-23 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 184 | 284 | 2.0E-23 | IPR000210 |
| Pfam | PF00917 | MATH domain | 50 | 154 | 2.2E-4 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 29 | 161 | 5.23E-31 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 172 | 285 | 7.46E-29 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 164 | 287 | 1.6E-36 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 29 | 161 | 8.9E-28 | IPR008974 |
| SMART | SM00225 | BTB_4 | 193 | 288 | 1.1E-15 | IPR000210 |
| SMART | SM00061 | math_3 | 35 | 140 | 0.0049 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 30 | 157 | 16.990198 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 193 | 260 | 18.368662 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_047084812.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium rigidum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7QXG2 | Speckle-type POZ protein-like protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_065873, gene-QYE76_066018, gene-QYE76_066019 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G385200 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG026790 |