Basic Information
Locus ID:
gene-QYE76_066017
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 226397779 | 226399434 | + | gene-QYE76_066017 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 60,707.56 Da | 43.56 | 78.35 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 378 | 508 | 3.08503E-17 | IPR002083 |
| CDD | cd00121 | MATH | 41 | 166 | 6.49022E-16 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 195 | 309 | 2.0E-23 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 376 | 513 | 8.18E-26 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 182 | 310 | 1.05E-29 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 42 | 170 | 2.45E-20 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 179 | 306 | 6.2E-35 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 38 | 170 | 8.9E-19 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 310 | 378 | 2.1E-17 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 379 | 511 | 8.4E-21 | IPR008974 |
| SMART | SM00225 | BTB_4 | 203 | 311 | 3.1E-22 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 377 | 507 | 12.82237 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 203 | 267 | 16.755466 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 37 | 166 | 13.33376 | IPR002083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 551 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 521 | 551 | - | - |
| Coils | Coil | Coil | 551 | 551 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_051229725.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium perenne] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T8IA12 | Uncharacterized protein OS=Panicum hallii OX=206008 GN=PAHAL_8G234300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_065872, gene-QYE76_066017 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0303908 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC1BG065000 |