Basic Information
Locus ID:
gene-QYE76_065995
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
DWNN domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 225236149 | 225237522 | - | gene-QYE76_065995 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.87 | 48,683.22 Da | 46.90 | 52.87 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16620 | vRING-HC-C4C4_RBBP6 | 204 | 245 | 9.75859E-12 | - |
| Pfam | PF08783 | DWNN domain | 3 | 81 | 3.2E-18 | IPR014891 |
| Pfam | PF13696 | Zinc knuckle | 154 | 174 | 1.0E-9 | IPR025829 |
| SUPERFAMILY | SSF57850 | RING/U-box | 192 | 270 | 1.55E-12 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 84 | 1.9E-18 | - |
| Gene3D | G3DSA:4.10.60.10 | - | 151 | 203 | 2.3E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 204 | 273 | 4.6E-11 | IPR013083 |
| SMART | SM01180 | DWNN_2 | 3 | 82 | 2.0E-32 | IPR014891 |
| ProSiteProfiles | PS51282 | DWNN domain profile. | 3 | 82 | 15.487767 | IPR014891 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 444 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47430.3 | DWNN domain, a CCHC-type zinc finger. | 0 |
| RefSeq | XP_047088608.1 | E3 ubiquitin ligase PQT3-like [Lolium rigidum] | 0 |
| B9DFV2 | E3 ubiquitin ligase PQT3-like OS=Arabidopsis thaliana OX=3702 GN=At5g47430 PE=1 SV=1 | 0 | |
| TrEMBL | F2E1Q0 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology