Basic Information
Locus ID:
gene-QYE76_065988
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 225022762 | 225033975 | + | gene-QYE76_065988 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 99,182.92 Da | 39.70 | 87.15 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 739 | 832 | 3.8557E-16 | - |
| Pfam | PF13650 | Aspartyl protease | 740 | 830 | 2.1E-5 | - |
| SUPERFAMILY | SSF50630 | Acid proteases | 735 | 840 | 1.39E-7 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 731 | 853 | 1.0E-23 | IPR021109 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 318 | - | - |
| Coils | Coil | Coil | 291 | 316 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_045089081.1 | uncharacterized protein LOC123497118 [Aegilops tauschii subsp. strangulata] | 0 |
| TrEMBL | A0A533HS20 | Retrotransposon gag domain-containing protein (Fragment) OS=Gemella sp. OX=1966354 GN=DI638_10665 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 35 | gene-QYE76_002238, gene-QYE76_002580, gene-QYE76_006006 ... |