Basic Information
Locus ID:
gene-QYE76_065818
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 218704094 | 218711404 | + | gene-QYE76_065818 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 90,008.03 Da | 50.98 | 87.30 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 430 | 514 | 8.58389E-6 | - |
| Pfam | PF03732 | Retrotransposon gag protein | 130 | 220 | 1.7E-9 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 534 | 596 | 1.56E-10 | IPR043502 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 411 | 524 | 2.9E-5 | IPR021109 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 525 | 633 | 1.2E-15 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 620 | 654 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 632 | 647 | - | - |
| Coils | Coil | Coil | 766 | 786 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022861324.1 | uncharacterized protein LOC111381741 [Olea europaea var. sylvestris] | 0 |
| TrEMBL | M8BEJ4 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 203 | gene-QYE76_000478, gene-QYE76_000950, gene-QYE76_001438 ... |