Basic Information
Locus ID:
gene-QYE76_065777
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 217553088 | 217553799 | - | gene-QYE76_065777 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.18 | 16,236.64 Da | 61.56 | 91.50 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 94 | 136 | 1.2E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 87 | 141 | 1.81E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 77 | 141 | 3.8E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 95 | 135 | 9.2E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 95 | 136 | 12.076194 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_006409124.1 | RING-H2 finger protein ATL56 [Eutrema salsugineum] | 0 |
| TrEMBL | V4M6G3 | RING-type domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10022879mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_007907, gene-QYE76_012502, gene-QYE76_040299 ... |