Basic Information
Locus ID:
gene-QYE76_065763
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Transposase family tnp2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 216878436 | 216882593 | - | gene-QYE76_065763 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 76,485.17 Da | 59.85 | 71.51 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 486 | 562 | 5.2E-22 | IPR025312 |
| Pfam | PF02992 | Transposase family tnp2 | 330 | 405 | 3.1E-33 | IPR004242 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 587 | 609 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 676 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 645 | 661 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 587 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 662 | 676 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 111 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051202323.1 | uncharacterized protein LOC127315924 [Lolium perenne] | 0 |
| TrEMBL | A0A8R7QJN3 | Transpos_assoc domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH01.2693, CH05.4449 |
| Poaceae | Lolium multiflorum | 24 | gene-QYE76_004977, gene-QYE76_006303, gene-QYE76_006527 ... |