Basic Information
Locus ID:
gene-QYE76_065610
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Belongs to the helicase family. RecQ subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 210353866 | 210357939 | + | gene-QYE76_065610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 69,275.96 Da | 36.55 | 76.22 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18794 | SF2_C_RecQ | 412 | 545 | 1.13853E-61 | - |
| CDD | cd17920 | DEXHc_RecQ | 214 | 411 | 4.18813E-103 | - |
| Pfam | PF16124 | RecQ zinc-binding | 548 | 617 | 7.0E-13 | IPR032284 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 432 | 535 | 1.6E-17 | IPR001650 |
| Pfam | PF00270 | DEAD/DEAH box helicase | 222 | 390 | 3.0E-17 | IPR011545 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 260 | 556 | 5.57E-54 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 177 | 411 | 2.1E-86 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 412 | 620 | 4.1E-58 | IPR027417 |
| SMART | SM00487 | ultradead3 | 216 | 420 | 6.6E-30 | IPR014001 |
| SMART | SM00490 | helicmild6 | 454 | 536 | 2.6E-24 | IPR001650 |
| TIGRFAM | TIGR00614 | recQ_fam: ATP-dependent DNA helicase, RecQ family | 214 | 619 | 4.6E-154 | IPR004589 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 433 | 579 | 18.919136 | IPR001650 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 228 | 404 | 22.272808 | IPR014001 |
| ProSitePatterns | PS00690 | DEAH-box subfamily ATP-dependent helicases signature. | 343 | 352 | - | IPR002464 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 191 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 165 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05740.1 | RECQ helicase l1. | 0 |
| RefSeq | XP_051180248.1 | ATP-dependent DNA helicase Q-like 1 [Lolium perenne] | 0 |
| Q9FT74 | ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana OX=3702 GN=RECQL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7Q500 | ATP-dependent DNA helicase OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology