Basic Information
Locus ID:
gene-QYE76_065564
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 208908123 | 208909295 | - | gene-QYE76_065564 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 43,352.09 Da | 40.62 | 82.82 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 34 | 163 | 2.6513E-24 | IPR002083 |
| Pfam | PF00917 | MATH domain | 56 | 159 | 8.3E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 210 | 318 | 1.2E-22 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 32 | 167 | 1.03E-25 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 197 | 320 | 1.95E-26 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 34 | 166 | 4.7E-23 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 320 | 388 | 1.3E-18 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 192 | 316 | 1.7E-30 | IPR011333 |
| SMART | SM00225 | BTB_4 | 216 | 321 | 2.7E-21 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 216 | 286 | 17.458652 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 33 | 162 | 18.728924 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.1 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_002442320.1 | BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811RBB3 | BTB domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS50801 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_5BG0442140 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_065528, gene-QYE76_065564 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_08G103900, gene-BS78_08G104000 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-50030 |