Basic Information
Locus ID:
gene-QYE76_065210
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins. Some of these proteins have been shown both in vivo and in vitro to have ubiquitin E3 ligase activity.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 197127921 | 197129024 | - | gene-QYE76_065210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 37,713.86 Da | 68.46 | 84.90 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 167 | 215 | 1.3615E-12 | - |
| Pfam | PF12906 | RING-variant domain | 167 | 214 | 3.9E-11 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 163 | 217 | 3.0E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 160 | 218 | 2.5E-14 | IPR013083 |
| SMART | SM00744 | ringv_2 | 166 | 215 | 4.2E-16 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 159 | 221 | 17.872038 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 159 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60580.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_047091424.1 | uncharacterized protein LOC124703246 isoform X1 [Lolium rigidum] | 0 |
| TrEMBL | A0A0Q3J320 | RING-CH-type domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_3g00220v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology