Basic Information
Locus ID:
gene-QYE76_065165
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
A domain family that is part of the cupin metalloenzyme superfamily.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 196017269 | 196025578 | + | gene-QYE76_065165 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 133,389.98 Da | 51.03 | 63.05 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02373 | JmjC domain, hydroxylase | 821 | 924 | 2.4E-13 | IPR003347 |
| Pfam | PF10497 | Zinc-finger domain of monoamine-oxidase A repressor R1 | 200 | 265 | 4.0E-5 | IPR018866 |
| SUPERFAMILY | SSF51197 | Clavaminate synthase-like | 521 | 968 | 1.14E-37 | - |
| Gene3D | G3DSA:2.60.120.650 | Cupin | 515 | 950 | 1.1E-151 | - |
| SMART | SM00558 | cupin_9 | 629 | 941 | 8.9E-68 | IPR003347 |
| SMART | SM00384 | AT_hook_2 | 9 | 21 | 0.76 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 108 | 120 | 2.0 | IPR017956 |
| ProSiteProfiles | PS51184 | JmjC domain profile. | 648 | 941 | 27.614964 | IPR003347 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 203 | 252 | 8.668251 | IPR001841 |
| PRINTS | PR00929 | AT-hook-like domain signature | 9 | 19 | 1.8E-5 | IPR017956 |
| PRINTS | PR00929 | AT-hook-like domain signature | 106 | 116 | 1.8E-5 | IPR017956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 778 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 807 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 978 | 1097 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1133 | 1169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1133 | 1186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 789 | 807 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1043 | 1069 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00990.1 | Transcription factor jumonji (jmjC) domain-containing protein. | 0 |
| RefSeq | XP_047087530.1 | LOW QUALITY PROTEIN: lysine-specific demethylase JMJ25-like [Lolium rigidum] | 0 |
| Q8VYB9 | Lysine-specific demethylase JMJ27 OS=Arabidopsis thaliana OX=3702 GN=JMJ27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453MSK2 | JmjC domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology