Basic Information
Locus ID:
gene-QYE76_064982
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 190204745 | 190212681 | + | gene-QYE76_064982 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 158,514.80 Da | 50.57 | 84.83 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09274 | RNase_HI_RT_Ty3 | 1072 | 1190 | 8.81468E-57 | - |
| CDD | cd00303 | retropepsin_like | 564 | 661 | 1.1298E-12 | - |
| CDD | cd01647 | RT_LTR | 871 | 995 | 6.36426E-28 | - |
| Pfam | PF03732 | Retrotransposon gag protein | 264 | 354 | 7.4E-9 | IPR005162 |
| Pfam | PF17917 | RNase H-like domain found in reverse transcriptase | 1066 | 1169 | 9.9E-34 | IPR041373 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 830 | 1173 | 1.56E-96 | IPR043502 |
| SUPERFAMILY | SSF50630 | Acid proteases | 561 | 669 | 4.28E-5 | IPR021109 |
| Gene3D | G3DSA:3.30.70.270 | - | 931 | 940 | 1.8E-19 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 942 | 1001 | 5.3E-19 | IPR043128 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 545 | 685 | 8.6E-18 | IPR021109 |
| Gene3D | G3DSA:3.30.70.270 | - | 1004 | 1077 | 1.5E-16 | IPR043128 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 833 | 930 | 1.8E-19 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 210 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021744072.1 | uncharacterized protein LOC110710127 [Chenopodium quinoa] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A2G9HYA0 | RNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |