Basic Information
Locus ID:
gene-QYE76_064788
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 183245847 | 183263192 | + | gene-QYE76_064788 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 159,839.78 Da | 49.87 | 85.37 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09274 | RNase_HI_RT_Ty3 | 1079 | 1197 | 8.55563E-57 | - |
| CDD | cd01647 | RT_LTR | 790 | 985 | 8.59646E-75 | - |
| CDD | cd00303 | retropepsin_like | 483 | 580 | 2.04548E-12 | - |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 829 | 984 | 6.4E-25 | IPR000477 |
| Pfam | PF03732 | Retrotransposon gag protein | 183 | 273 | 3.9E-9 | IPR005162 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 1048 | 1146 | 3.7E-34 | IPR041577 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 749 | 1180 | 1.67E-140 | IPR043502 |
| SUPERFAMILY | SSF50630 | Acid proteases | 480 | 588 | 5.29E-5 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 464 | 602 | 4.4E-18 | IPR021109 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 752 | 910 | 1.3E-67 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 850 | 985 | 1.3E-67 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 994 | 1087 | 1.1E-27 | IPR043128 |
| ProSiteProfiles | PS50878 | Reverse transcriptase (RT) catalytic domain profile. | 788 | 992 | 8.773122 | IPR000477 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1340 | 1364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1227 | 1272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1235 | 1254 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1341 | 1355 | - | - |
| Coils | Coil | Coil | 1379 | 1399 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_019098329.1 | PREDICTED: uncharacterized protein LOC109131614, partial [Camelina sativa] | 0 |
| P04323 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A2G9HYA0 | RNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 203 | gene-QYE76_000478, gene-QYE76_000950, gene-QYE76_001438 ... |