Basic Information
Locus ID:
gene-QYE76_064401
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 168009906 | 168017059 | + | gene-QYE76_064401 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.63 | 159,543.88 Da | 50.93 | 88.52 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14798 | RX-CC_like | 8 | 83 | 3.32786E-8 | IPR038005 |
| CDD | cd06410 | PB1_UP2 | 1109 | 1208 | 4.12539E-40 | - |
| CDD | cd00009 | AAA | 170 | 218 | 3.4198E-4 | - |
| Pfam | PF18052 | Rx N-terminal domain | 11 | 93 | 1.9E-14 | IPR041118 |
| Pfam | PF00564 | PB1 domain | 1124 | 1209 | 1.5E-14 | IPR000270 |
| Pfam | PF00931 | NB-ARC domain | 174 | 398 | 2.4E-24 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 541 | 865 | 2.75E-18 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 158 | 411 | 2.72E-43 | IPR027417 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 1125 | 1217 | 9.81E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 529 | 875 | 4.1E-11 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 147 | 299 | 1.4E-19 | IPR027417 |
| Gene3D | G3DSA:1.10.10.10 | - | 391 | 487 | 1.7E-12 | IPR036388 |
| Gene3D | G3DSA:1.20.5.4130 | - | 10 | 124 | 3.1E-18 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 1125 | 1209 | 1.6E-7 | - |
| SMART | SM00666 | PB1_new | 1120 | 1210 | 1.1E-26 | IPR000270 |
| PRINTS | PR00364 | Disease resistance protein signature | 344 | 358 | 1.6E-6 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 193 | 208 | 1.6E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1394 | 1430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1412 | 1430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1027 | 1098 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50950.1 | HOPZ-ACTIVATED RESISTANCE 1. | 0 |
| RefSeq | XP_044961691.1 | disease resistance protein RGA5-like isoform X1 [Hordeum vulgare subsp. vulgare] | 0 |
| Q2R8L1 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6HYZ0 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology