Basic Information
Locus ID:
gene-QYE76_064342
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
domain in FBox and BRCT domain containing plant proteins
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 165820423 | 165827443 | + | gene-QYE76_064342 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 54,376.79 Da | 51.30 | 90.00 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 10 | 43 | 8.0E-8 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 157 | 354 | 5.1E-11 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 47 | 4.45E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 45 | 2.8E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 109 | 404 | 5.1E-12 | IPR032675 |
| SMART | SM00256 | fbox_2 | 10 | 49 | 7.3E-6 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 4 | 40 | 10.822189 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58860.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_051229629.1 | putative F-box/LRR-repeat protein At5g02700 [Lolium perenne] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | M8CJZ0 | F-box domain-containing protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_033590, gene-QYE76_061000, gene-QYE76_061001 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS3A02G087600.1.cds1, TraesCS3B02G102700.1.cds1 ... |