Basic Information
Locus ID:
gene-QYE76_064314
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 164736719 | 164745869 | + | gene-QYE76_064314 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 111,366.90 Da | 56.23 | 76.60 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 334 | 424 | 4.8E-9 | IPR005162 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 796 | 811 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 780 | 816 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 147 | - | - |
| Coils | Coil | Coil | 930 | 950 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051229489.1 | uncharacterized protein LOC127347333 [Lolium perenne] | 0 |
| TrEMBL | A0A7H4LDJ6 | Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS1284 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 203 | gene-QYE76_000478, gene-QYE76_000950, gene-QYE76_001438 ... |